rsRNA Detail
Query and analyze the annotation information of rsRNA and its expression characteristics in different tissues, sources and diseases.
Quick Filters
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First time here
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| Origin | Subtype | Spacer | Fragment | Start | End | Sequence | Length | Expressed in Samples | Expressed in Tissues | Expressed in Sources | Expressed in Diseases | Max Expr | Biomarker |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| {{ row.Origin }} | {{ row.Subtype }} | {{ row.Spacer }} | {{ row.Fragment }} | {{ row.Start }} | {{ row.End }} | {{ row.Sequence }} | {{ row.Length }} | {{ row.Expressed_of_Samples }} | {{ row.Expressed_of_Tissues }} | {{ row.Expressed_of_Sources }} | {{ row.Expressed_of_Diseases }} | {{ row.Maximum_Expression }} | {{ row.Biomarker }} |
Subtype Origin – {{ selectedRsRNA }}
Full sequence: {{ subtypeOriginData.subtype }} rRNA ({{ subtypeOriginData.total_len }} nt)
1
{{ subtypeOriginData.total_len }}
-50 nt
+50 nt
{{ subtypeOriginData.upstream_seq }}
{{ subtypeOriginData.rsrna_seq }}
{{ subtypeOriginData.downstream_seq }}
Position {{ subtypeOriginData.position }}
{{ subtypeOriginData.length }} nt
{{ subtypeOriginData.end_type }}
{{ subtypeOriginData.spacer }}
Knowledge graphs for: {{ selectedRsRNA }}
Click the node to view the relevant datasets of tissue origin, source origin and disease origin.
Expression charts for: {{ selectedRsRNA }}
Slide on the charts to see detailed analysis
rsRNA targets for: {{ selectedRsRNA }}
Matches From rRFTargetdb
| Subtype | Start | End | Sequence | Target Transcript | Target Region | Target Gene | Target Biotype | Unique Hybrids | Read Count | F/R | MFE |
|---|---|---|---|---|---|---|---|---|---|---|---|
| {{ row.Subtype }} | {{ row.Start }} | {{ row.End }} | {{ row.Sequence }} | {{ row['Target Transcript'] }} | {{ row['Target Region'] }} | {{ row['Target gene'] }} | {{ row['Target Biotype'] }} | {{ row['Unique Hybrids'] }} | {{ row['Read Count'] }} | {{ row['F/R'] }} | {{ row['MFE'] }} |